UCLA MBI
—
ProKnow
HELP
Tips
Email: Debnath Pal
Welcome to the ProKnow server.
ProKnow predicts the function of proteins from sequence or structure.
Submit your protein sequence or structure for analysis below. Click
here
for useful tips.
Job Parameters
If you would like to submit multiple sequences, use the batch
submission form
.
Your email:
« Your results will be sent to that address.
NCBI species code:
H. sapiens (9606)
S. cerevisiae (4932)
M. tuberculosis H37Rv (83332)
A. thaliana (3702)
Other:
« Select the species of the organism to which your protein belongs. Leave blank if unknown.
BLAST type:
PSIBLAST
BLAST
Use DIP:
DIP Off
DIP On
« Include data from the
Database of Interacting Proteins
?
Use ProLinks:
ProLinks Off
ProLinks On
« Include data from the
ProLinks
?
Evidence Level:
Level 0
Level 1
« ?
Submission type:
Sequence Submission
« Submission of proteins structures is temporarily disabled due to maintenance
Structure Submission
PDB File:
« Upload a PDB file with the structure.
FSSP Files:
« Upload at least one FSSP file.
FSSP files
provide information about fold similarity of your protein.
Sequence Submission
FASTA File:
FASTA Sequence:
« Either upload a text file in FASTA format with the protein sequence, or paste the sequence (or FASTA file) into this box.