UCLA MBI — SERp Server: SER Help

Help Topics: Averaging Window BLAST Seq. ID Cutoff BLAST Sequence count weight BLAST Weight BLAST eValue Cutoff Cluster Limit Cluster Sequence Snippet Cluster Sorting Email Address Entropy Cutoff Entropy Weight Gaps Size Graph Size Graphs High Entropy Residues Last Jobs Maximum Mutations Minimum Mutations Mutable Residues Protein or DNA Sequence Queue Status Result Delivery Method Sec. Str. Cutoff Sec. Str. Weight Secondary Structure Prediction Sequence Identifier Sidechain Entropy Target Residues

The expectation value cutoff value for the BLAST search. Aligned sequences with the expectation value above this cutoff are not considered while determine the conservation level for a position in the sequence. Such sequences will be listed on the BLAST Results tab but will not affect the residues scoring.

Molecular Biology Institure at the University of California, Los Angeles.